| Ident. | Authors (with country if any) | Title |
|---|
| 000931 (2019) |
Huayang Li [République populaire de Chine] ; Guangzhao Xu [République populaire de Chine] ; Chao Yang [République populaire de Chine] ; Long Yang [République populaire de Chine] ; Zhenchang Liang [République populaire de Chine] | Genome-wide identification and expression analysis of HKT transcription factor under salt stress in nine plant species. |
| 001829 (2016) |
Hanwei Yan [République populaire de Chine] ; Xiaogang Dai [République populaire de Chine] ; Kai Feng [République populaire de Chine] ; Qiuyue Ma [République populaire de Chine] ; Tongming Yin [République populaire de Chine] | IGDD: a database of intronless genes in dicots. |
| 001847 (2016) |
Hui Cao [Oman] ; Cai-Yun Liu ; Chun-Xiang Liu ; Yue-Ling Zhao ; Rui-Rui Xu | Genomewide analysis of the lateral organ boundaries domain gene family in Vitis vinifera. |
| 001E46 (2015) |
Yiyi Wang [République populaire de Chine] ; Lin Feng [République populaire de Chine] ; Yuxin Zhu [République populaire de Chine] ; Yuan Li [République populaire de Chine] ; Hanwei Yan [République populaire de Chine] ; Yan Xiang [République populaire de Chine] | Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice. |
| 002018 (2014) |
Cédric Moisy [France] ; Alan H. Schulman ; Ruslan Kalendar ; Jan P. Buchmann ; Frédérique Pelsy | The Tvv1 retrotransposon family is conserved between plant genomes separated by over 100 million years. |
| 002159 (2014) |
José Tomás Matus [Chili] ; Felipe Aquea [Chili] ; Carmen Espinoza [Chili] ; Andrea Vega [Chili] ; Erika Cavallini [Italie] ; Silvia Dal Santo [Italie] ; Paola Ca N [Chili] ; Amparo Rodríguez-Hoces De La Guardia [Chili] ; Jennifer Serrano [Chili] ; Giovanni Battista Tornielli [Italie] ; Patricio Arce-Johnson [Chili] | Inspection of the grapevine BURP superfamily highlights an expansion of RD22 genes with distinctive expression features in berry development and ABA-mediated stress responses. |
| 002218 (2014) |
Rashmi Gaur [Oman] ; Sabhyata Bhatia ; Meetu Gupta | Generation of expressed sequence tags under cadmium stress for gene discovery and development of molecular markers in chickpea. |
| 002285 (2014) |
Lianhua Guo ; Yingnan Chen ; Ning Ye ; Xiaogang Dai ; Wanxu Yang ; Tongming Yin [République populaire de Chine] | Differential retention and expansion of the ancestral genes associated with the paleopolyploidies in modern rosid plants, as revealed by analysis of the extensins super-gene family. |
| 002346 (2014) |
Evgeny E. Akkuratov [États-Unis] ; Lorraine Walters [États-Unis] ; Arnab Saha-Mandal [États-Unis] ; Sushant Khandekar [États-Unis] ; Erin Crawford [États-Unis] ; Craig L. Zirbel [États-Unis] ; Scott Leisner [États-Unis] ; Ashwin Prakash [États-Unis] ; Larisa Fedorova [États-Unis] ; Alexei Fedorov [États-Unis] | Bioinformatics analysis of plant orthologous introns: identification of an intronic tRNA-like sequence. |
| 002672 (2013) |
Silvia Dal Santo [Italie] ; Alessandro Vannozzi ; Giovanni Battista Tornielli ; Marianna Fasoli ; Luca Venturini ; Mario Pezzotti ; Sara Zenoni | Genome-wide analysis of the expansin gene superfamily reveals grapevine-specific structural and functional characteristics. |
| 002804 (2013) |
Chad Brocker [États-Unis] ; Melpomene Vasiliou ; Sarah Carpenter ; Christopher Carpenter ; Yucheng Zhang ; Xiping Wang ; Simeon O. Kotchoni ; Andrew J. Wood ; Hans-Hubert Kirch ; David Kope N ; Daniel W. Nebert ; Vasilis Vasiliou | Aldehyde dehydrogenase (ALDH) superfamily in plants: gene nomenclature and comparative genomics. |
| 002814 (2013) |
Thomas K Llman [Suède] ; Jun Chen ; Niclas Gyllenstrand ; Ulf Lagercrantz | A significant fraction of 21-nucleotide small RNA originates from phased degradation of resistance genes in several perennial species. |
| 002834 (2012) |
Ji-Sen Shi [République populaire de Chine] ; Zhan-Jun Wang ; Jin-Hui Chen | [Progress on whole genome sequencing in woody plants]. |
| 002B49 (2012) |
Laura Baxter [Royaume-Uni] ; Aleksey Jironkin ; Richard Hickman ; Jay Moore ; Christopher Barrington ; Peter Krusche ; Nigel P. Dyer ; Vicky Buchanan-Wollaston ; Alexander Tiskin ; Jim Beynon ; Katherine Denby ; Sascha Ott | Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants. |
| 002B67 (2012) |
Michiharu Nakano [Japon] ; Takehiko Shimada ; Tomoko Endo ; Hiroshi Fujii ; Hirohisa Nesumi ; Masayuki Kita ; Masumi Ebina ; Tokurou Shimizu ; Mitsuo Omura | Characterization of genomic sequence showing strong association with polyembryony among diverse Citrus species and cultivars, and its synteny with Vitis and Populus. |
| 002D92 (2011) |
Zhen-Zhen Zhang [République populaire de Chine] ; Xiao-Xi Li ; Bao-Qing Zhu ; Ya-Qin Wen ; Chang-Qing Duan ; Qiu-Hong Pan | Molecular characterization and expression analysis on two isogenes encoding 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase in grapes. |
| 002E77 (2011) |
Anna Hangyáné Benkovics [Hongrie] ; Tünde Nyik ; Zsuzsanna Mérai ; Dániel Silhavy ; György Dénes Bisztray | Functional analysis of the grapevine paralogs of the SMG7 NMD factor using a heterolog VIGS-based gene depletion-complementation system. |
| 002E95 (2011) |
Rachel A. Okrent [États-Unis] ; Mary C. Wildermuth | Evolutionary history of the GH3 family of acyl adenylases in rosids. |
| 002F52 (2011) |
Chu-Yu Ye [États-Unis] ; Ting Li ; Gerald A. Tuskan ; Timothy J. Tschaplinski ; Xiaohan Yang | Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis. |
| 002F96 (2011) |
Jun Cao [République populaire de Chine] ; Jinling Huang ; Yongping Yang ; Xiangyang Hu | Analyses of the oligopeptide transporter gene family in poplar and grape. |
| 003223 (2010) |
Jill M. Duarte [États-Unis] ; P Kerr Wall ; Patrick P. Edger ; Lena L. Landherr ; Hong Ma ; J Chris Pires ; Jim Leebens-Mack ; Claude W. Depamphilis | Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels. |
| 003243 (2010) |
Jia-Xing Yue [République populaire de Chine] ; Jinpeng Li ; Dan Wang ; Hitoshi Araki ; Dacheng Tian ; Sihai Yang | Genome-wide investigation reveals high evolutionary rates in annual model plants. |
| 003246 (2010) |
Qi Liu [République populaire de Chine] ; Chiyu Zhang ; Yongping Yang ; Xiangyang Hu | Genome-wide and molecular evolution analyses of the phospholipase D gene family in Poplar and Grape. |
| 003329 (2010) |
Alberto Cenci [France] ; Marie-Christine Combes ; Philippe Lashermes | Comparative sequence analyses indicate that Coffea (Asterids) and Vitis (Rosids) derive from the same paleo-hexaploid ancestral genome. |
| 003451 (2009) |
David Sankoff [Canada] ; Chunfang Zheng ; P Kerr Wall ; Claude Depamphilis ; Jim Leebens-Mack ; Victor A. Albert | Towards improved reconstruction of ancestral gene order in angiosperm phylogeny. |
| 003536 (2009) |
Rafael Navajas-Pérez [États-Unis] ; Andrew H. Paterson | Patterns of tandem repetition in plant whole genome assemblies. |
| 003565 (2009) |
Romain Guyot [France] ; Marion De La Mare ; Véronique Viader ; Perla Hamon ; Olivier Coriton ; José Bustamante-Porras ; Valérie Poncet ; Claudine Campa ; Serge Hamon ; Alexandre De Kochko | Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes. |
| 003612 (2009) |
José Díaz-Riquelme [Espagne] ; Diego Lijavetzky ; José M. Martínez-Zapater ; María José Carmona | Genome-wide analysis of MIKCC-type MADS box genes in grapevine. |
| 003621 (2009) |
Chunfang Zheng [Canada] ; P. Kerr Wall ; James Leebens-Mack ; Claude De Pamphilis ; Victor A. Albert ; David Sankoff | Gene loss under neighborhood selection following whole genome duplication and the reconstruction of the ancestral Populus genome. |
| 003732 (2008) |
Giorgio Gambino [Italie] ; Irene Perrone ; Ivana Gribaudo | A Rapid and effective method for RNA extraction from different tissues of grapevine and other woody plants. |
| 003833 (2008) |
Sihai Yang [République populaire de Chine] ; Xiaohui Zhang ; Jia-Xing Yue ; Dacheng Tian ; Jian-Qun Chen | Recent duplications dominate NBS-encoding gene expansion in two woody species. |
| 003854 (2008) |
Alberto Nonis [Italie] ; Benedetto Ruperti ; Alessandro Pierasco ; Aurelie Canaguier ; Anne-Françoise Adam-Blondon ; Gabriele Di Gaspero ; Giannina Vizzotto | Neutral invertases in grapevine and comparative analysis with Arabidopsis, poplar and rice. |
| 003922 (2008) |
Eric Lyons [États-Unis] ; Brent Pedersen ; Josh Kane ; Maqsudul Alam ; Ray Ming ; Haibao Tang ; Xiyin Wang ; John Bowers ; Andrew Paterson ; Damon Lisch ; Michael Freeling | Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids. |
| 003975 (2008) |
Gabino Ríos [Espagne] ; Miguel A. Naranjo ; Domingo J. Iglesias ; Omar Ruiz-Rivero ; Marion Geraud ; Antonio Usach ; Manuel Tal N | Characterization of hemizygous deletions in citrus using array-comparative genomic hybridization and microsynteny comparisons with the poplar genome. |
| 003A11 (2008) |
Bingyu Zhang [République populaire de Chine] ; Xiaohua Su ; Xiangming Zhou | A MADS-box gene of Populus deltoides expressed during flower development and in vegetative organs. |
| 003A55 (2007) |
Olivier Jaillon [France] ; Jean-Marc Aury ; Benjamin Noel ; Alberto Policriti ; Christian Clepet ; Alberto Casagrande ; Nathalie Choisne ; Sébastien Aubourg ; Nicola Vitulo ; Claire Jubin ; Alessandro Vezzi ; Fabrice Legeai ; Philippe Hugueney ; Corinne Dasilva ; David Horner ; Erica Mica ; Delphine Jublot ; Julie Poulain ; Clémence Bruyère ; Alain Billault ; Béatrice Segurens ; Michel Gouyvenoux ; Edgardo Ugarte ; Federica Cattonaro ; Véronique Anthouard ; Virginie Vico ; Cristian Del Fabbro ; Michaël Alaux ; Gabriele Di Gaspero ; Vincent Dumas ; Nicoletta Felice ; Sophie Paillard ; Irena Juman ; Marco Moroldo ; Simone Scalabrin ; Aurélie Canaguier ; Isabelle Le Clainche ; Giorgio Malacrida ; Eléonore Durand ; Graziano Pesole ; Valérie Laucou ; Philippe Chatelet ; Didier Merdinoglu ; Massimo Delledonne ; Mario Pezzotti ; Alain Lecharny ; Claude Scarpelli ; François Artiguenave ; M Enrico Pè ; Giorgio Valle ; Michele Morgante ; Michel Caboche ; Anne-Françoise Adam-Blondon ; Jean Weissenbach ; Francis Quétier ; Patrick Wincker | The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. |
| 004528 (2002) |
Virginie Lauvergeat [France] ; Philippe Rech ; Alain Jauneau ; Colette Guez ; Pierre Coutos-Thevenot ; Jacqueline Grima-Pettenati | The vascular expression pattern directed by the Eucalyptus gunnii cinnamyl alcohol dehydrogenase EgCAD2 promoter is conserved among woody and herbaceous plant species. |
